STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_017147RNA-binding with serine-rich domain 1. (249 aa)    
Predicted Functional Partners:
BpHYR1_042266
Regulator of nonsense transcripts 2 isoform X1.
    
 0.997
BpHYR1_041880
Eukaryotic initiation factor 4A-III; Belongs to the DEAD box helicase family.
   
 0.996
BpHYR1_009539
Histone deacetylase complex subunit SAP18.
   
 0.995
BpHYR1_013204
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
 0.994
BpHYR1_009758
Regulator of nonsense transcripts 3A.
   
 0.992
BpHYR1_053407
Pinin.
   
 0.988
BpHYR1_053697
Apoptotic chromatin condensation inducer in the nucleus-like isoform X2.
   
 0.984
BpHYR1_036102
Apoptotic chromatin condensation inducer in the nucleus isoform X3.
   
 0.984
BpHYR1_016790
Regulator of nonsense transcripts 1.
    
 0.976
BpHYR1_006767
Regulator of nonsense transcripts 1.
    
 0.976
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.