STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_008840Cell wall integrity and stress response component 4-like. (405 aa)    
Predicted Functional Partners:
BpHYR1_036213
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.933
BpHYR1_026629
Extracellular matrix FRAS1.
    
 0.730
BpHYR1_031135
Extracellular matrix FRAS1.
    
 0.730
BpHYR1_031137
Extracellular matrix FRAS1.
    
 0.730
BpHYR1_031136
Extracellular matrix FRAS1.
    
 0.730
BpHYR1_021188
Extracellular matrix FRAS1 isoform X2.
    
 0.730
BpHYR1_032260
Histone chaperone asf1.
    
 0.683
BpHYR1_006593
Putative serine threonine-kinase pats1.
   
 0.673
BpHYR1_035183
Leucine-rich repeat serine threonine-kinase 1.
   
 0.673
BpHYR1_011270
Nucleoporin GLE1.
    
 0.672
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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