Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
BpHYR1_012981 | BpHYR1_028727 | A0A3M7RB32 | A0A3M7T5T8 | PHD and RING finger domain-containing 1. | Deformed epidermal autoregulatory factor 1 isoform X2. | 0.528 |
BpHYR1_025678 | BpHYR1_028727 | A0A3M7SGX1 | A0A3M7T5T8 | E3 ubiquitin-ligase pellino-like. | Deformed epidermal autoregulatory factor 1 isoform X2. | 0.503 |
BpHYR1_028727 | BpHYR1_012981 | A0A3M7T5T8 | A0A3M7RB32 | Deformed epidermal autoregulatory factor 1 isoform X2. | PHD and RING finger domain-containing 1. | 0.528 |
BpHYR1_028727 | BpHYR1_025678 | A0A3M7T5T8 | A0A3M7SGX1 | Deformed epidermal autoregulatory factor 1 isoform X2. | E3 ubiquitin-ligase pellino-like. | 0.503 |
BpHYR1_028727 | BpHYR1_031458 | A0A3M7T5T8 | A0A3M7R578 | Deformed epidermal autoregulatory factor 1 isoform X2. | Transmembrane protein-like. | 0.420 |
BpHYR1_031458 | BpHYR1_028727 | A0A3M7R578 | A0A3M7T5T8 | Transmembrane protein-like. | Deformed epidermal autoregulatory factor 1 isoform X2. | 0.420 |