STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_039712Chromosome transmission fidelity 8-like protein. (622 aa)    
Predicted Functional Partners:
BpHYR1_011793
Chromosome transmission fidelity 8-like protein.
   
 0.996
BpHYR1_013569
Replication factor C subunit 3.
   
 0.994
BpHYR1_054326
Replication factor C subunit 5.
   
0.994
BpHYR1_041651
Replication factor C subunit 2.
   
 0.993
BpHYR1_022137
Replication factor C subunit 4.
   
0.992
BpHYR1_002695
DNA polymerase epsilon catalytic subunit; DNA polymerase II participates in chromosomal DNA replication; Belongs to the DNA polymerase type-B family.
   
 0.992
BpHYR1_037873
DNA polymerase.
   
 0.988
BpHYR1_019845
Sister chromatid cohesion.
   
 0.978
BpHYR1_044267
Sister chromatid cohesion DCC1.
   
 0.978
BpHYR1_026574
Sister chromatid cohesion.
   
 0.971
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.