STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_031938Synaptotagmin-16 isoform X4. (675 aa)    
Predicted Functional Partners:
BpHYR1_020528
Stoned B; Belongs to the adaptor complexes medium subunit family.
   
 0.765
BpHYR1_023508
Rab-3-interacting molecule unc-10.
     
 0.742
BpHYR1_008714
Intersectin-1 isoform X7.
     
 0.717
BpHYR1_008715
Intersectin-2 isoform X1.
     
 0.717
BpHYR1_032415
Ras-related Rab-3 isoform X1.
   
 0.702
BpHYR1_001023
Synaptosomal-associated protein; Belongs to the SNAP-25 family.
   
 0.697
BpHYR1_006703
Methyltransferase type 11.
   
 0.694
BpHYR1_031223
Regulating synaptic membrane exocytosis 2.
     
 0.686
BpHYR1_051944
Regulating synaptic membrane exocytosis 2-like.
     
 0.686
BpHYR1_031078
Regulating synaptic membrane exocytosis 2-like isoform X2.
     
 0.686
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.