STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_022705Hydroxymethylbilane synthase. (412 aa)    
Predicted Functional Partners:
BpHYR1_042985
Uroporphyrinogen-III synthase isoform X1.
  
 0.998
BpHYR1_011268
Delta-aminolevulinic acid dehydratase; Belongs to the ALAD family.
 
 0.997
BpHYR1_051583
Uroporphyrinogen decarboxylase; Belongs to the uroporphyrinogen decarboxylase family.
 
 0.981
BpHYR1_011406
Endonuclease V.
  
 0.969
BpHYR1_030933
Ferrochelatase; Catalyzes the ferrous insertion into protoporphyrin IX.
  
  
 0.795
BpHYR1_030099
Dihydrofolate reductase.
    
 0.794
BpHYR1_052224
Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.
    
 0.794
BpHYR1_036702
Deoxyuridine 5-triphosphate mitochondrial isoform X2.
  
 
  0.764
BpHYR1_000533
MAP kinase kinase kinase; Belongs to the protein kinase superfamily.
     
 0.763
BpHYR1_027765
MKL myocardin 2 isoform X1.
     
 0.763
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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