STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_026101Phosphoglycolate phosphatase; Belongs to the HAD-like hydrolase superfamily. (299 aa)    
Predicted Functional Partners:
BpHYR1_003030
Pyridoxal kinase.
    
 0.858
BpHYR1_042943
Dehydrogenase reductase SDR family 7-like; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.810
BpHYR1_019091
Glyoxylate reductase hydroxypyruvate reductase-like; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.752
BpHYR1_026426
Glyoxylate reductase hydroxypyruvate reductase-like; Belongs to the D-isomer specific 2-hydroxyacid dehydrogenase family.
  
 
 0.752
BpHYR1_022867
Pyridoxine-5-phosphate oxidase.
  
 
 0.751
BpHYR1_031884
Pyridoxine-5-phosphate oxidase-like.
  
 
 0.751
BpHYR1_037102
Haloacid dehalogenase-like hydrolase domain-containing 3.
  
 
 0.738
BpHYR1_028311
ATP synthase subunit mitochondrial.
  
 
 0.705
BpHYR1_048832
V-type proton ATPase subunit D.
  
 
  0.697
BpHYR1_018324
V-type proton ATPase subunit E 1.
   
 
 0.697
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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