Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| BpHYR1_008284 | BpHYR1_009846 | A0A3M7RYW5 | A0A3M7SUZ8 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | CREB-binding-like isoform X2. | 0.787 |
| BpHYR1_008284 | BpHYR1_013311 | A0A3M7RYW5 | A0A3M7QT02 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Retinoic acid receptor beta isoform X5. | 0.869 |
| BpHYR1_008284 | BpHYR1_021211 | A0A3M7RYW5 | A0A3M7T2L8 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Thyroid hormone receptor beta isoform X3. | 0.855 |
| BpHYR1_008284 | BpHYR1_021212 | A0A3M7RYW5 | A0A3M7T2S9 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Oxysterols receptor LXR-alpha. | 0.855 |
| BpHYR1_008284 | BpHYR1_021644 | A0A3M7RYW5 | A0A3M7RUF9 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Retinoic acid receptor gamma-like. | 0.869 |
| BpHYR1_008284 | BpHYR1_026177 | A0A3M7RYW5 | A0A3M7T8H8 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Retinoic acid receptor RXR. | 0.974 |
| BpHYR1_008284 | BpHYR1_037652 | A0A3M7RYW5 | A0A3M7RPD6 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear hormone receptor HR96-like isoform X3. | 0.855 |
| BpHYR1_008284 | BpHYR1_038901 | A0A3M7RYW5 | A0A3M7S0C7 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor subfamily 4 group A member. | 0.668 |
| BpHYR1_008284 | BpHYR1_046337 | A0A3M7RYW5 | A0A3M7PIP0 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Nuclear receptor corepressor 1-like. | 0.752 |
| BpHYR1_008284 | BpHYR1_052242 | A0A3M7RYW5 | A0A3M7TA15 | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | Mediator of RNA polymerase II transcription subunit 16 isoform X1. | 0.986 |
| BpHYR1_009846 | BpHYR1_008284 | A0A3M7SUZ8 | A0A3M7RYW5 | CREB-binding-like isoform X2. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.787 |
| BpHYR1_009846 | BpHYR1_013311 | A0A3M7SUZ8 | A0A3M7QT02 | CREB-binding-like isoform X2. | Retinoic acid receptor beta isoform X5. | 0.473 |
| BpHYR1_009846 | BpHYR1_021211 | A0A3M7SUZ8 | A0A3M7T2L8 | CREB-binding-like isoform X2. | Thyroid hormone receptor beta isoform X3. | 0.737 |
| BpHYR1_009846 | BpHYR1_021212 | A0A3M7SUZ8 | A0A3M7T2S9 | CREB-binding-like isoform X2. | Oxysterols receptor LXR-alpha. | 0.737 |
| BpHYR1_009846 | BpHYR1_021644 | A0A3M7SUZ8 | A0A3M7RUF9 | CREB-binding-like isoform X2. | Retinoic acid receptor gamma-like. | 0.473 |
| BpHYR1_009846 | BpHYR1_026177 | A0A3M7SUZ8 | A0A3M7T8H8 | CREB-binding-like isoform X2. | Retinoic acid receptor RXR. | 0.933 |
| BpHYR1_009846 | BpHYR1_037652 | A0A3M7SUZ8 | A0A3M7RPD6 | CREB-binding-like isoform X2. | Nuclear hormone receptor HR96-like isoform X3. | 0.737 |
| BpHYR1_009846 | BpHYR1_038901 | A0A3M7SUZ8 | A0A3M7S0C7 | CREB-binding-like isoform X2. | Nuclear receptor subfamily 4 group A member. | 0.502 |
| BpHYR1_009846 | BpHYR1_046337 | A0A3M7SUZ8 | A0A3M7PIP0 | CREB-binding-like isoform X2. | Nuclear receptor corepressor 1-like. | 0.831 |
| BpHYR1_013311 | BpHYR1_008284 | A0A3M7QT02 | A0A3M7RYW5 | Retinoic acid receptor beta isoform X5. | Mediator of RNA polymerase II transcription subunit 1; Component of the Mediator complex, a coactivator involved in the regulated transcription of nearly all RNA polymerase II-dependent genes. Mediator functions as a bridge to convey information from gene- specific regulatory proteins to the basal RNA polymerase II transcription machinery. Mediator is recruited to promoters by direct interactions with regulatory proteins and serves as a scaffold for the assembly of a functional preinitiation complex with RNA polymerase II and the general transcription factors. | 0.869 |
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