STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_047885Zer-1-like protein. (1385 aa)    
Predicted Functional Partners:
BpHYR1_024954
Cullin-2; Belongs to the cullin family.
    
 
 0.769
BpHYR1_018705
Cullin-2; Belongs to the cullin family.
    
 
 0.769
BpHYR1_038852
Transcription elongation factor B polypeptide 1; Belongs to the SKP1 family.
    
 
 0.750
BpHYR1_039627
Transcription elongation factor B polypeptide 2.
    
 
 0.544
BpHYR1_027715
Leucine-rich repeat 1.
      
 0.538
BpHYR1_020395
Folylpolyglutamate mitochondrial isoform X1.
      
 0.493
BpHYR1_053819
Vacuolar protein sorting-associated protein 11 homolog; Belongs to the VPS11 family.
      
 0.481
BpHYR1_048942
UBX domain-containing 6.
   
  
 0.419
BpHYR1_000445
Cullin-3 isoform X1; Belongs to the cullin family.
    
 
 0.413
BpHYR1_034760
Cullin-5; Belongs to the cullin family.
   
  
 0.411
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.