STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_019865Glycogen synthase kinase-3 beta isoform X2; Belongs to the protein kinase superfamily. (456 aa)    
Predicted Functional Partners:
BpHYR1_015715
Axin.
   
 0.986
BpHYR1_013062
Axin-1.
   
 0.986
BpHYR1_019753
Catenin beta-1.
    
 0.966
BpHYR1_019462
Catenin beta-like.
    
 0.966
BpHYR1_054478
Junction plakoglobin-like.
    
 0.966
BpHYR1_028255
Beta-isoform X1.
    
 0.965
BpHYR1_016708
Presenilin; Probable subunit of the gamma-secretase complex, an endoprotease complex that catalyzes the intramembrane cleavage of integral membrane proteins such as Notch receptors. Belongs to the peptidase A22A family.
   
 0.958
BpHYR1_013566
Microtubule-associated protein.
    
 0.957
BpHYR1_033367
Microtubule-associated 4-like.
    
 0.957
BpHYR1_044758
TNF receptor-associated factor 6.
   
 0.955
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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