STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_035189Adenosine 3-phospho 5-phosphosulfate transporter 1. (450 aa)    
Predicted Functional Partners:
BpHYR1_040050
UDP-xylose and UDP-N-acetylglucosamine transporter.
      
 0.569
BpHYR1_050932
UDP-sugar transporter UST74c.
   
  
 0.562
BpHYR1_033872
Beta-1-4-galactosyltransferase 7.
   
  
 0.558
BpHYR1_012620
GDP-fucose transporter 1-like.
   
  
 0.557
BpHYR1_039724
Solute carrier family 35 member E2-like.
    
 
 0.543
BpHYR1_042648
Solute carrier family 35 member C2.
      
 0.538
BpHYR1_026822
Translocation SEC62.
   
  
 0.528
BpHYR1_032885
Translocation SEC63-like protein.
    
 
 0.523
BpHYR1_044830
ERO1 beta isoform X2.
    
 
 0.522
BpHYR1_007362
Alkyl transferase; Belongs to the UPP synthase family.
  
 
 0.500
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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