STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_002092Polyadenylate-binding 7. (290 aa)    
Predicted Functional Partners:
BpHYR1_047309
Cell division cycle 5.
   
   0.856
BpHYR1_013174
Barrier-to-autointegration factor.
   
 0.812
BpHYR1_053328
RNA-binding 25-like.
   
 0.811
BpHYR1_007744
Serine arginine repetitive matrix 1 isoform X3.
   
 0.727
BpHYR1_033963
Transcription elongation regulator 1.
   
  0.696
BpHYR1_024191
Luc7 3.
   
 0.683
BpHYR1_049296
Luc7 3.
   
 0.683
BpHYR1_053316
Serine threonine-kinase PRP4-like protein.
   
 0.671
BpHYR1_004537
Superkiller viralicidic activity 2-like 2.
   
 0.651
BpHYR1_006593
Putative serine threonine-kinase pats1.
    
  0.647
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.