STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BpHYR1_052251Ribonuclease mitochondrial. (698 aa)    
Predicted Functional Partners:
BpHYR1_047866
Endonuclease.
   
   0.966
BpHYR1_027267
Zinc phosphodiesterase ELAC 1.
  
  
0.839
BpHYR1_012611
ATP-dependent RNA helicase mitochondrial.
   
  
 0.828
BpHYR1_039238
Periodic tryptophan 2-like protein.
   
    0.790
BpHYR1_018228
Exosome complex component RRP41-like.
  
 
 0.709
BpHYR1_037143
Exosome complex component MTR3.
  
 
 0.709
BpHYR1_027944
tRNA (adenine(58)-N(1))-methyltransferase catalytic subunit TRMT61A; Catalytic subunit of tRNA (adenine-N(1)-)-methyltransferase, which catalyzes the formation of N(1)-methyladenine at position 58 (m1A58) in initiator methionyl-tRNA.
  
  
 0.692
BpHYR1_034827
Corrinoid adenosyltransferase; Belongs to the Cob(I)alamin adenosyltransferase family.
    
  0.670
BpHYR1_014218
Transducin beta 3.
   
    0.632
BpHYR1_035725
Exosome component 10-like.
  
 
 0.623
Your Current Organism:
Brachionus plicatilis
NCBI taxonomy Id: 10195
Other names: B. plicatilis
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