STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELS00713.1Putative transcriptional regulator with HTH domain; PFAM: Divergent AAA domain; IMG reference gene:2508648239_SP. (522 aa)    
Predicted Functional Partners:
ELS04529.1
Hypothetical protein.
   
  0.691
recG
ATP-dependent DNA helicase RecG; Critical role in recombination and DNA repair. Helps process Holliday junction intermediates to mature products by catalyzing branch migration. Has a DNA unwinding activity characteristic of a DNA helicase with a 3'- to 5'- polarity. Unwinds branched duplex DNA (Y- DNA); Belongs to the helicase family. RecG subfamily.
  
  
  0.578
ELS04526.1
Putative NADH-flavin reductase; PFAM: NmrA-like family.
   
    0.575
ELS00712.1
Cation/multidrug efflux pump; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
       0.501
ELS04773.1
TIGRFAM: methyltransferase, FkbM family.
 
     0.487
ELS02434.1
Sulfotransferase family protein; PFAM: Sulfotransferase domain.
  
     0.473
ELS04441.1
Hypothetical protein; PFAM: Fic/DOC family.
 
  
  0.468
ELS00394.1
PFAM: Lipid A 3-O-deacylase (PagL).
   
    0.442
ELS00484.1
Hypothetical protein.
   
    0.442
ELS04229.1
Hypothetical protein.
   
    0.442
Your Current Organism:
Xenococcus sp. PCC7305
NCBI taxonomy Id: 102125
Other names: X. sp. PCC 7305, Xenococcus sp. ATCC 29373, Xenococcus sp. PCC 7305
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