STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELS00847.1Sterol desaturase; PFAM: Fatty acid hydroxylase superfamily. (167 aa)    
Predicted Functional Partners:
ELS01058.1
Squalene-hopene cyclase; PFAM: Prenyltransferase and squalene oxidase repeat; TIGRFAM: squalene/oxidosqualene cyclases; squalene-hopene cyclase.
   
 0.862
ELS03552.1
Phytoene/squalene synthetase; PFAM: Squalene/phytoene synthase.
  
 0.830
ELS04080.1
Phytoene/squalene synthetase; PFAM: Squalene/phytoene synthase.
  
 0.830
ELS05207.1
Hypothetical protein; TIGRFAM: DNA phosphorothioation-associated putative methyltransferase.
   
 0.652
ELS02530.1
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; PFAM: FAD binding domain.
   
 0.592
ELS02606.1
PFAM: FAD binding domain; TIGRFAM: Ubiquinone biosynthesis hydroxylase, UbiH/UbiF/VisC/COQ6 family.
   
 0.592
ELS02858.1
Flavin-dependent dehydrogenase.
   
 0.592
ELS05381.1
2-polyprenyl-6-methoxyphenol hydroxylase-like oxidoreductase; PFAM: FAD binding domain.
   
 0.592
ELS03658.1
Hypothetical protein.
   
 0.535
ELS04684.1
PFAM: Cytochrome P450.
   
 0.535
Your Current Organism:
Xenococcus sp. PCC7305
NCBI taxonomy Id: 102125
Other names: X. sp. PCC 7305, Xenococcus sp. ATCC 29373, Xenococcus sp. PCC 7305
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