STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELS00890.1PFAM: Domain of unknown function (DUF1823). (123 aa)    
Predicted Functional Partners:
ELS04086.1
PFAM: Protein of unknown function (DUF3146).
  
     0.773
ELS05660.1
Hypothetical protein.
  
     0.755
ELS03318.1
PFAM: Protein of unknown function (DUF2997).
  
     0.748
ELS02273.1
Ycf34-like protein; PFAM: Hypothetical chloroplast protein Ycf34.
  
     0.731
rpmF
PFAM: Ribosomal L32p protein family; TIGRFAM: ribosomal protein L32; Belongs to the bacterial ribosomal protein bL32 family.
  
     0.730
ELS05212.1
PFAM: Protein of unknown function (DUF3110).
  
     0.723
psbU
Photosystem II 12 kDa extrinsic protein (PsbU); Stabilizes the structure of photosystem II oxygen-evolving complex (OEC), the ion environment of oxygen evolution and protects the OEC against heat-induced inactivation.
  
     0.715
cpcS
Phycobilin lyase, CpcS-I subunit; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
     0.709
psbV
Cytochrome c-550; Low-potential cytochrome c that plays a role in the oxygen- evolving complex of photosystem II.
  
     0.706
ELS03409.1
PFAM: Domain of unknown function (DUF1815).
  
     0.702
Your Current Organism:
Xenococcus sp. PCC7305
NCBI taxonomy Id: 102125
Other names: X. sp. PCC 7305, Xenococcus sp. ATCC 29373, Xenococcus sp. PCC 7305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.