STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELS01975.1PFAM: Protein of unknown function (DUF3539). (92 aa)    
Predicted Functional Partners:
ELS04315.1
Global nitrogen regulator NtcA, cyanobacterial; PFAM: Bacterial regulatory proteins, crp family; Cyclic nucleotide-binding domain; TIGRFAM: global nitrogen regulator NtcA, cyanobacterial.
  
 
 
 0.969
ELS00972.1
PFAM: Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
    
 
 0.968
ELS01743.1
PFAM: Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
    
 
 0.941
ELS01007.1
PFAM: Bacterial regulatory proteins, crp family.
  
 
 
 0.886
rpoZ
DNA-directed RNA polymerase, subunit K/omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
  
 
  0.828
ELS04115.1
Hypothetical protein.
  
     0.775
ELS04847.1
PFAM: Protein of unknown function (DUF3155).
  
     0.775
ELS05083.1
PFAM: Protein of unknown function (DUF3493).
  
     0.775
ELS01466.1
Hypothetical protein.
  
     0.773
ELS03971.1
Hypothetical protein; PFAM: Uncharacterised BCR, COG1649.
  
     0.766
Your Current Organism:
Xenococcus sp. PCC7305
NCBI taxonomy Id: 102125
Other names: X. sp. PCC 7305, Xenococcus sp. ATCC 29373, Xenococcus sp. PCC 7305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.