STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pcyA-2Phycocyanobilin:ferredoxin oxidoreductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family. (253 aa)    
Predicted Functional Partners:
ELS00601.1
PFAM: Heme oxygenase.
 
  
 0.873
ELS03507.1
Putative dehydrogenase; PFAM: Oxidoreductase family, NAD-binding Rossmann fold.
     
 0.822
ELS01884.1
15,16-dihydrobiliverdin:ferredoxin oxidoreductase; PFAM: Ferredoxin-dependent bilin reductase; Belongs to the HY2 family.
     
0.812
ELS01381.1
PFAM: Chlorophyll A-B binding protein.
  
     0.774
ELS00304.1
Hypothetical protein.
  
     0.773
ELS01646.1
PFAM: Domain of unknown function (DUF1825).
  
     0.773
ELS01903.1
Hypothetical protein.
  
     0.773
ELS05212.1
PFAM: Protein of unknown function (DUF3110).
  
     0.773
ELS03093.1
Hypothetical protein.
  
     0.772
ELS03931.1
Hypothetical protein.
  
     0.770
Your Current Organism:
Xenococcus sp. PCC7305
NCBI taxonomy Id: 102125
Other names: X. sp. PCC 7305, Xenococcus sp. ATCC 29373, Xenococcus sp. PCC 7305
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