STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELS02886.1PFAM: MatE; TIGRFAM: putative efflux protein, MATE family. (442 aa)    
Predicted Functional Partners:
ELS03552.1
Phytoene/squalene synthetase; PFAM: Squalene/phytoene synthase.
   
 
 0.652
ELS04080.1
Phytoene/squalene synthetase; PFAM: Squalene/phytoene synthase.
   
 
 0.652
ELS05217.1
PFAM: GUN4-like.
  
     0.641
ELS04007.1
PFAM: GUN4-like.
  
     0.636
ELS01377.1
PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
  
 0.593
ELS01873.1
PFAM: Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain; Glyceraldehyde 3-phosphate dehydrogenase, NAD binding domain; TIGRFAM: glyceraldehyde-3-phosphate dehydrogenase, type I; Belongs to the glyceraldehyde-3-phosphate dehydrogenase family.
   
  
 0.593
ELS01965.1
Ribosomal protein S1; PFAM: S1 RNA binding domain.
   
    0.575
ELS02635.1
Ribosomal protein S1; PFAM: S1 RNA binding domain.
   
    0.575
ELS02887.1
PFAM: S23 ribosomal protein.
     
 0.557
ELS04050.1
Putative membrane protein; PFAM: DoxX.
  
    0.538
Your Current Organism:
Xenococcus sp. PCC7305
NCBI taxonomy Id: 102125
Other names: X. sp. PCC 7305, Xenococcus sp. ATCC 29373, Xenococcus sp. PCC 7305
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