STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELS03402.1Lignostilbene-alpha,beta-dioxygenase-like enzyme; PFAM: Retinal pigment epithelial membrane protein. (679 aa)    
Predicted Functional Partners:
ELS03401.1
PAS domain S-box; PFAM: Protein kinase domain; Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; GAF domain; His Kinase A (phosphoacceptor) domain; TIGRFAM: PAS domain S-box.
 
     0.693
ELS03531.1
PFAM: HEAT repeat.
  
     0.552
ELS03252.1
Transposase family protein; PFAM: Transposase DDE domain.
  
     0.523
ELS01000.1
PFAM: Transposase domain (DUF772).
  
     0.519
ELS02448.1
Transposase family protein; PFAM: Transposase DDE domain.
  
     0.510
ELS05327.1
Transposase family protein; PFAM: Transposase DDE domain; IMG reference gene:2508652962_SP.
  
     0.510
ELS05354.1
Transposase family protein; PFAM: Transposase DDE domain.
  
     0.510
ELS03431.1
PFAM: YcfA-like protein.
  
     0.496
ELS02296.1
Polyketide synthase family protein; PFAM: Acyl transferase domain; AMP-binding enzyme; Beta-ketoacyl synthase, C-terminal domain; Phosphopantetheine attachment site; KR domain; Alcohol dehydrogenase GroES-like domain; Beta-ketoacyl synthase, N-terminal domain; Zinc-binding dehydrogenase.
   
 0.463
ELS04597.1
ABC-type uncharacterized transport system, permease and ATPase component; PFAM: ABC transporter; ABC transporter transmembrane region 2.
  
  
  0.462
Your Current Organism:
Xenococcus sp. PCC7305
NCBI taxonomy Id: 102125
Other names: X. sp. PCC 7305, Xenococcus sp. ATCC 29373, Xenococcus sp. PCC 7305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.