STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELS04147.1Conserved domain protein; PFAM: Domain of unknown function (DUF2382); TIGRFAM: conserved domain. (325 aa)    
Predicted Functional Partners:
ELS00822.1
PFAM: Photosynthetic reaction centre protein; TIGRFAM: Photosystem II, DII subunit (also called Q(A)); IMG reference gene:2508648319_SP; Belongs to the reaction center PufL/M/PsbA/D family.
   
 
 0.866
ELS03214.1
Hypothetical protein.
   
 
 0.866
ELS04490.1
PFAM: Photosynthetic reaction centre protein; TIGRFAM: Photosystem II, DII subunit (also called Q(A)); IMG reference gene:2508652113_SP.
   
 
 0.866
ELS05659.1
Hypothetical protein.
   
 
 0.866
psbA
Photosystem II DI subunit, Q(B) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.
   
   0.861
ELS04829.1
Hypothetical protein.
   
   0.861
psbA-2
Photosystem II DI subunit, Q(B) protein; Photosystem II (PSII) is a light-driven water:plastoquinone oxidoreductase that uses light energy to abstract electrons from H(2)O, generating O(2) and a proton gradient subsequently used for ATP formation. It consists of a core antenna complex that captures photons, and an electron transfer chain that converts photonic excitation into a charge separation. The D1/D2 (PsbA/PsbA) reaction center heterodimer binds P680, the primary electron donor of PSII as well as several subsequent electron acceptors.
   
   0.861
ELS05568.1
PFAM: Photosynthetic reaction centre protein; TIGRFAM: photosystem II, DI subunit (also called Q(B)); IMG reference gene:2508653212_SP; Belongs to the reaction center PufL/M/PsbA/D family.
   
   0.861
ELS05666.1
PFAM: Photosynthetic reaction centre protein; TIGRFAM: photosystem II, DI subunit (also called Q(B)).
   
   0.861
ELS04146.1
Dehydrogenase of unknown specificity; PFAM: short chain dehydrogenase.
 
    0.767
Your Current Organism:
Xenococcus sp. PCC7305
NCBI taxonomy Id: 102125
Other names: X. sp. PCC 7305, Xenococcus sp. ATCC 29373, Xenococcus sp. PCC 7305
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