STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELS05273.1PFAM: PBS lyase HEAT-like repeat. (422 aa)    
Predicted Functional Partners:
ELS03509.1
HEAT repeat-containing protein.
 
  
 0.947
cpcT-2
CpeT/CpcT family (DUF1001); Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
  
 0.942
cpcS-4
Phycoerythrobilin lyase CpeS; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
  
 0.935
ELS02193.1
CpcD; PFAM: CpcD/allophycocyanin linker domain; Phycobilisome Linker polypeptide; Belongs to the phycobilisome linker protein family.
  
  
  0.927
ELS03511.1
PFAM: Phycobilisome protein; IMG reference gene:2508651104_SP.
 
  
 0.920
ELS04472.1
PFAM: Phycobilisome protein.
 
  
 0.920
ELS02194.1
CpcD; PFAM: Phycobilisome Linker polypeptide; CpcD/allophycocyanin linker domain; Belongs to the phycobilisome linker protein family.
  
  
  0.904
ELS02792.1
PFAM: Phycobilisome Linker polypeptide; Belongs to the phycobilisome linker protein family.
  
  
  0.872
cpcS-3
CpeU protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
  
 0.863
ELS02192.1
CpcD; PFAM: Phycobilisome Linker polypeptide; CpcD/allophycocyanin linker domain; Belongs to the phycobilisome linker protein family.
  
  
  0.838
Your Current Organism:
Xenococcus sp. PCC7305
NCBI taxonomy Id: 102125
Other names: X. sp. PCC 7305, Xenococcus sp. ATCC 29373, Xenococcus sp. PCC 7305
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.