STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332355_00225Unannotated protein. (229 aa)    
Predicted Functional Partners:
GCA_000332355_03216
Unannotated protein.
 
  
 0.940
GCA_000332355_04721
Unannotated protein.
 
 0.857
GCA_000332355_04487
Unannotated protein.
 
  
 0.786
GCA_000332355_00860
Unannotated protein.
  
 
 0.648
GCA_000332355_01236
Unannotated protein.
 
     0.489
GCA_000332355_00226
Unannotated protein.
       0.480
GCA_000332355_00227
Unannotated protein.
       0.480
GCA_000332355_03625
Unannotated protein.
  
     0.432
Your Current Organism:
Geitlerinema sp. PCC7105
NCBI taxonomy Id: 102127
Other names: G. sp. PCC 7105, Geitlerinema sp. PCC 7105, LPP group ATCC 29120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.