STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332355_02469Unannotated protein. (300 aa)    
Predicted Functional Partners:
GCA_000332355_02468
Unannotated protein.
       0.686
GCA_000332355_02470
Unannotated protein.
   
   0.630
GCA_000332355_02774
Unannotated protein.
   
 
  0.536
GCA_000332355_03529
Unannotated protein.
   
 
  0.536
GCA_000332355_04081
Unannotated protein.
   
 
  0.536
GCA_000332355_04018
Unannotated protein.
   
  0.454
GCA_000332355_04527
Unannotated protein.
   
 0.440
GCA_000332355_02467
Unannotated protein.
   
   0.431
GCA_000332355_02471
Unannotated protein.
   
   0.414
Your Current Organism:
Geitlerinema sp. PCC7105
NCBI taxonomy Id: 102127
Other names: G. sp. PCC 7105, Geitlerinema sp. PCC 7105, LPP group ATCC 29120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.