STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332355_02675Unannotated protein. (341 aa)    
Predicted Functional Partners:
GCA_000332355_04405
Unannotated protein.
 
  
 0.576
GCA_000332355_04363
Unannotated protein.
  
 
 0.574
GCA_000332355_04743
Unannotated protein.
  
 0.488
GCA_000332355_03277
Unannotated protein.
   
 
 0.483
GCA_000332355_00661
Unannotated protein.
  
 0.480
GCA_000332355_02674
Unannotated protein.
 
    0.480
GCA_000332355_01422
Unannotated protein.
     
 0.465
GCA_000332355_04527
Unannotated protein.
     
 0.465
GCA_000332355_00647
Unannotated protein.
    
  0.430
GCA_000332355_02676
Unannotated protein.
  
    0.422
Your Current Organism:
Geitlerinema sp. PCC7105
NCBI taxonomy Id: 102127
Other names: G. sp. PCC 7105, Geitlerinema sp. PCC 7105, LPP group ATCC 29120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.