STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332355_02699Unannotated protein. (1974 aa)    
Predicted Functional Partners:
GCA_000332355_02290
Unannotated protein.
  
     0.770
GCA_000332355_00787
Unannotated protein.
  
  
 0.740
GCA_000332355_01076
Unannotated protein.
  
  
0.726
GCA_000332355_01726
Unannotated protein.
  
 
 
0.721
GCA_000332355_03795
Unannotated protein.
  
 
 
0.721
GCA_000332355_03020
Unannotated protein.
   
 
 0.714
GCA_000332355_00927
Unannotated protein.
  
 
 
0.684
GCA_000332355_03798
Unannotated protein.
  
 
 
0.678
GCA_000332355_00786
Unannotated protein.
 
  
 0.677
GCA_000332355_00372
Unannotated protein.
    
  0.601
Your Current Organism:
Geitlerinema sp. PCC7105
NCBI taxonomy Id: 102127
Other names: G. sp. PCC 7105, Geitlerinema sp. PCC 7105, LPP group ATCC 29120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.