STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332355_03860Unannotated protein. (261 aa)    
Predicted Functional Partners:
GCA_000332355_03861
Unannotated protein.
 
  
 0.987
GCA_000332355_00481
Unannotated protein.
  
     0.651
GCA_000332355_02580
Unannotated protein.
  
     0.569
GCA_000332355_03862
Unannotated protein.
       0.543
GCA_000332355_00745
Unannotated protein.
  
     0.487
GCA_000332355_03858
Unannotated protein.
       0.457
GCA_000332355_03859
Unannotated protein.
       0.457
GCA_000332355_01175
Unannotated protein.
  
     0.449
GCA_000332355_01176
Unannotated protein.
  
     0.435
GCA_000332355_01173
Unannotated protein.
  
     0.425
Your Current Organism:
Geitlerinema sp. PCC7105
NCBI taxonomy Id: 102127
Other names: G. sp. PCC 7105, Geitlerinema sp. PCC 7105, LPP group ATCC 29120
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.