STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000332355_04549Unannotated protein. (345 aa)    
Predicted Functional Partners:
GCA_000332355_04545
Unannotated protein.
    
  0.624
GCA_000332355_01940
Unannotated protein.
 
0.619
GCA_000332355_02233
Unannotated protein.
   
 
  0.553
GCA_000332355_04548
Unannotated protein.
       0.505
GCA_000332355_04527
Unannotated protein.
  
 
 0.446
GCA_000332355_03656
Unannotated protein.
  
     0.423
GCA_000332355_04547
Unannotated protein.
       0.411
GCA_000332355_02379
Unannotated protein.
  
  
  0.406
Your Current Organism:
Geitlerinema sp. PCC7105
NCBI taxonomy Id: 102127
Other names: G. sp. PCC 7105, Geitlerinema sp. PCC 7105, LPP group ATCC 29120
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.