STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKU99574.1CRISPR-associated endoribonuclease Cas6; IMG reference gene:2509841618; PFAM: Uncharacterized conserved protein (DUF2276); TIGRFAM: CRISPR-associated endoribonuclease Cas6. (288 aa)    
Predicted Functional Partners:
EKV02088.1
CRISPR-associated protein Csc1; IMG reference gene:2509844273; TIGRFAM: CRISPR type I-D/CYANO-associated protein Csc1.
 
     0.777
EKV02087.1
CRISPR-associated protein Csc2; IMG reference gene:2509844272; TIGRFAM: CRISPR type I-D/CYANO-associated protein Csc2.
 
     0.776
EKV02079.1
Hypothetical protein; IMG reference gene:2509844264.
 
     0.771
EKV02080.1
CRISPR-associated helicase, Cas3 family; IMG reference gene:2509844265; PFAM: DEAD/DEAH box helicase; TIGRFAM: CRISPR-associated helicase Cas3, subtype CYANO.
 
     0.698
EKV02507.1
Hypothetical protein; IMG reference gene:2509844725.
  
     0.671
EKV02086.1
CRISPR-associated protein Csc3; IMG reference gene:2509844271; TIGRFAM: CRISPR type I-D/CYANO-associated protein Csc3/Cas10d.
 
     0.614
EKV02092.1
CRISPR-associated exonuclease, Cas4 family; CRISPR (clustered regularly interspaced short palindromic repeat) is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Belongs to the CRISPR-associated exonuclease Cas4 family.
 
   
 0.562
EKU98343.1
Hypothetical protein; IMG reference gene:2509847605.
  
     0.548
EKV03269.1
FHA domain-containing protein; IMG reference gene:2509845540; PFAM: FHA domain.
  
     0.536
EKV02030.1
Hypothetical protein; IMG reference gene:2509844212.
  
     0.486
Your Current Organism:
Leptolyngbya sp. PCC7375
NCBI taxonomy Id: 102129
Other names: Acrophormium splendidus PCC 7375, Adonisia splendidus PCC 7375, L. sp. PCC 7375, Leptolyngbya sp. PCC 7375
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.