STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKV00967.1Transcriptional regulator; IMG reference gene:2509843088; PFAM: Bacterial regulatory proteins, tetR family; YsiA-like protein, C-terminal region. (202 aa)    
Predicted Functional Partners:
EKU96425.1
Malonyl CoA-acyl carrier protein transacylase; IMG reference gene:2509840408; PFAM: Acyl transferase domain; TIGRFAM: malonyl CoA-acyl carrier protein transacylase.
    
 0.577
pth
peptidyl-tRNA hydrolase; The natural substrate for this enzyme may be peptidyl-tRNAs which drop off the ribosome during protein synthesis. Belongs to the PTH family.
   
    0.501
EKV00968.1
IMG reference gene:2509843089; PFAM: Glutathione S-transferase, N-terminal domain; Glutathione S-transferase, C-terminal domain.
       0.496
EKV00966.1
Hypothetical protein; IMG reference gene:2509843087; PFAM: Domain of unknown function (DUF362).
       0.476
EKV00134.1
Transcriptional regulator; IMG reference gene:2509842215; PFAM: Bacterial regulatory proteins, tetR family.
  
     0.442
EKV03256.1
Amino acid adenylation enzyme/thioester reductase family protein; IMG reference gene:2509845526; PFAM: Thioesterase domain; Phosphopantetheine attachment site; Methyltransferase domain; Condensation domain; AMP-binding enzyme; TIGRFAM: amino acid adenylation domain.
   
 
 0.425
Your Current Organism:
Leptolyngbya sp. PCC7375
NCBI taxonomy Id: 102129
Other names: Acrophormium splendidus PCC 7375, Adonisia splendidus PCC 7375, L. sp. PCC 7375, Leptolyngbya sp. PCC 7375
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.