STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EKV01170.1IMG reference gene:2509843296; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family. (428 aa)    
Predicted Functional Partners:
EKV01171.1
Cation/multidrug efflux pump; IMG reference gene:2509843297; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
 
  
  0.892
EKV02508.1
Outer membrane protein; IMG reference gene:2509844726; PFAM: Outer membrane efflux protein.
 
 0.832
EKV01724.1
Cation/multidrug efflux pump; IMG reference gene:2509843888; PFAM: AcrB/AcrD/AcrF family; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
  
  
  0.804
EKV02802.1
Outer membrane protein; IMG reference gene:2509845047; PFAM: Outer membrane efflux protein.
  
 0.787
EKU98835.1
ABC-type bacteriocin transporter; IMG reference gene:2509848144; PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family; Cyclic nucleotide-binding domain; TIGRFAM: ABC-type bacteriocin transporter; type I secretion system ABC transporter, HlyB family.
  
 0.710
EKU97243.1
IMG reference gene:2509846403; TIGRFAM: RND family efflux transporter, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
  
  0.661
EKU96741.1
ABC-type bacteriocin/lantibiotic exporter with N-terminal double-glycine peptidase domain; IMG reference gene:2509840636; PFAM: Peptidase C39 family; ABC transporter; ABC transporter transmembrane region; Cyclic nucleotide-binding domain; TIGRFAM: ABC-type bacteriocin transporter; type I secretion system ABC transporter, HlyB family.
  
  0.657
EKV00207.1
Multidrug resistance efflux pump; IMG reference gene:2509842293.
  
     0.636
EKU99330.1
Bacteriocin-processing peptidase; IMG reference gene:2509841340; PFAM: ABC transporter transmembrane region; ABC transporter; Peptidase C39 family.
  
  0.634
EKU98783.1
NHLM bacteriocin system ABC transporter, peptidase/ATP-binding protein; IMG reference gene:2509848088; PFAM: ABC transporter; Peptidase C39 family; ABC transporter transmembrane region; TIGRFAM: NHLM bacteriocin system ABC transporter, peptidase/ATP-binding protein.
  
  0.625
Your Current Organism:
Leptolyngbya sp. PCC7375
NCBI taxonomy Id: 102129
Other names: Acrophormium splendidus PCC 7375, Adonisia splendidus PCC 7375, L. sp. PCC 7375, Leptolyngbya sp. PCC 7375
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