Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EKU99170.1 | EKU99406.1 | Lepto7375DRAFT_1188 | Lepto7375DRAFT_1445 | IMG reference gene:2509841171; PFAM: Protein of unknown function (DUF3493). | Hypothetical protein; IMG reference gene:2509841428. | 0.708 |
EKU99170.1 | EKV00756.1 | Lepto7375DRAFT_1188 | Lepto7375DRAFT_2888 | IMG reference gene:2509841171; PFAM: Protein of unknown function (DUF3493). | IMG reference gene:2509842871; PFAM: Protein of unknown function (DUF3155). | 0.772 |
EKU99170.1 | EKV01842.1 | Lepto7375DRAFT_1188 | Lepto7375DRAFT_4034 | IMG reference gene:2509841171; PFAM: Protein of unknown function (DUF3493). | Hypothetical protein; IMG reference gene:2509844017. | 0.758 |
EKU99170.1 | EKV01970.1 | Lepto7375DRAFT_1188 | Lepto7375DRAFT_4165 | IMG reference gene:2509841171; PFAM: Protein of unknown function (DUF3493). | IMG reference gene:2509844148; PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD. | 0.754 |
EKU99170.1 | EKV02102.1 | Lepto7375DRAFT_1188 | Lepto7375DRAFT_4305 | IMG reference gene:2509841171; PFAM: Protein of unknown function (DUF3493). | Hypothetical protein; IMG reference gene:2509844288. | 0.750 |
EKU99170.1 | EKV02284.1 | Lepto7375DRAFT_1188 | Lepto7375DRAFT_4507 | IMG reference gene:2509841171; PFAM: Protein of unknown function (DUF3493). | Hypothetical protein; IMG reference gene:2509844490. | 0.766 |
EKU99170.1 | EKV02615.1 | Lepto7375DRAFT_1188 | Lepto7375DRAFT_4859 | IMG reference gene:2509841171; PFAM: Protein of unknown function (DUF3493). | Hypothetical protein; IMG reference gene:2509844842. | 0.772 |
EKU99170.1 | EKV03094.1 | Lepto7375DRAFT_1188 | Lepto7375DRAFT_5370 | IMG reference gene:2509841171; PFAM: Protein of unknown function (DUF3493). | IMG reference gene:2509845353; PFAM: Protein of unknown function (DUF3539). | 0.774 |
EKU99170.1 | EKV03832.1 | Lepto7375DRAFT_1188 | Lepto7375DRAFT_6148 | IMG reference gene:2509841171; PFAM: Protein of unknown function (DUF3493). | CO2 hydration protein; IMG reference gene:2509846131; PFAM: CO2 hydration protein (ChpXY); TIGRFAM: CO2 hydration protein. | 0.595 |
EKU99406.1 | EKU99170.1 | Lepto7375DRAFT_1445 | Lepto7375DRAFT_1188 | Hypothetical protein; IMG reference gene:2509841428. | IMG reference gene:2509841171; PFAM: Protein of unknown function (DUF3493). | 0.708 |
EKU99406.1 | EKV00756.1 | Lepto7375DRAFT_1445 | Lepto7375DRAFT_2888 | Hypothetical protein; IMG reference gene:2509841428. | IMG reference gene:2509842871; PFAM: Protein of unknown function (DUF3155). | 0.658 |
EKU99406.1 | EKV01842.1 | Lepto7375DRAFT_1445 | Lepto7375DRAFT_4034 | Hypothetical protein; IMG reference gene:2509841428. | Hypothetical protein; IMG reference gene:2509844017. | 0.737 |
EKU99406.1 | EKV01970.1 | Lepto7375DRAFT_1445 | Lepto7375DRAFT_4165 | Hypothetical protein; IMG reference gene:2509841428. | IMG reference gene:2509844148; PFAM: rod shape-determining protein MreD; TIGRFAM: rod shape-determining protein MreD. | 0.772 |
EKU99406.1 | EKV02102.1 | Lepto7375DRAFT_1445 | Lepto7375DRAFT_4305 | Hypothetical protein; IMG reference gene:2509841428. | Hypothetical protein; IMG reference gene:2509844288. | 0.602 |
EKU99406.1 | EKV02284.1 | Lepto7375DRAFT_1445 | Lepto7375DRAFT_4507 | Hypothetical protein; IMG reference gene:2509841428. | Hypothetical protein; IMG reference gene:2509844490. | 0.549 |
EKU99406.1 | EKV02615.1 | Lepto7375DRAFT_1445 | Lepto7375DRAFT_4859 | Hypothetical protein; IMG reference gene:2509841428. | Hypothetical protein; IMG reference gene:2509844842. | 0.761 |
EKU99406.1 | EKV03094.1 | Lepto7375DRAFT_1445 | Lepto7375DRAFT_5370 | Hypothetical protein; IMG reference gene:2509841428. | IMG reference gene:2509845353; PFAM: Protein of unknown function (DUF3539). | 0.714 |
EKU99406.1 | EKV03832.1 | Lepto7375DRAFT_1445 | Lepto7375DRAFT_6148 | Hypothetical protein; IMG reference gene:2509841428. | CO2 hydration protein; IMG reference gene:2509846131; PFAM: CO2 hydration protein (ChpXY); TIGRFAM: CO2 hydration protein. | 0.541 |
EKV00756.1 | EKU99170.1 | Lepto7375DRAFT_2888 | Lepto7375DRAFT_1188 | IMG reference gene:2509842871; PFAM: Protein of unknown function (DUF3155). | IMG reference gene:2509841171; PFAM: Protein of unknown function (DUF3493). | 0.772 |
EKV00756.1 | EKU99406.1 | Lepto7375DRAFT_2888 | Lepto7375DRAFT_1445 | IMG reference gene:2509842871; PFAM: Protein of unknown function (DUF3155). | Hypothetical protein; IMG reference gene:2509841428. | 0.658 |
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