STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELR97330.1PFAM: Protein of unknown function (DUF3110). (124 aa)    
Predicted Functional Partners:
ELR98065.1
WD40 repeat-containing protein; PFAM: DnaJ domain; WD domain, G-beta repeat.
    
 0.827
murQ
N-acetylmuramic acid 6-phosphate etherase; Specifically catalyzes the cleavage of the D-lactyl ether substituent of MurNAc 6-phosphate, producing GlcNAc 6-phosphate and D- lactate.
       0.800
ELR97332.1
Putative membrane-associated Zn-dependent protease; PFAM: Peptidase family M50.
       0.797
ELR97939.1
PFAM: Domain of unknown function (DUF1825).
  
     0.770
pcyA
Phycocyanobilin:ferredoxin oxidoreductase; Catalyzes the four-electron reduction of biliverdin IX-alpha (2-electron reduction at both the A and D rings); the reaction proceeds via an isolatable 2-electron intermediate, 181,182-dihydrobiliverdin. Belongs to the HY2 family.
  
     0.770
ELR97528.1
Hypothetical protein.
  
     0.769
ELR98125.1
Hypothetical protein; IMG reference gene:2508645662_SP.
  
     0.745
ELR97333.1
PFAM: Domain of unknown function DUF29.
       0.732
psb27
Photosystem II protein Psb27; Plays a role in the repair and/or biogenesis of the calcium- manganese-oxide cluster on the lumenal face of the thylakoid membrane. Its presence in a photosystem II (PSII) preparation prevents binding of some small extrinsic subunits and thus assembly of calcium-manganese- oxide cluster.
  
     0.714
cpcS-2
Phycobilin lyase, CpcU subunit; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
     0.704
Your Current Organism:
Gloeocapsa sp. PCC73106
NCBI taxonomy Id: 102232
Other names: Chroococcus sp. SAG 6.82, G. sp. PCC 73106, Gloeocapsa sp. ATCC 27928, Gloeocapsa sp. PCC 73106
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