STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELR97556.1Putative transcriptional regulator; PFAM: HTH domain. (325 aa)    
Predicted Functional Partners:
ELR97557.1
PFAM: Cas6 Crispr; TIGRFAM: CRISPR-associated protein Cas6, subtype MYXAN.
 
     0.921
ELR97558.1
TIGRFAM: CRISPR-associated helicase Cas3; CRISPR-associated endonuclease Cas3-HD.
 
     0.919
ELR97560.1
TIGRFAM: CRISPR-associated autoregulator DevR family; CRISPR-associated protein Cas7/Cst2/DevR, subtype I-B/TNEAP.
 
     0.894
ELR97561.1
TIGRFAM: CRISPR-associated protein Cas5, N-terminal domain; CRISPR-associated protein Cas5/DevS, subtype MYXAN.
 
     0.816
ELR97559.1
TIGRFAM: CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype; CRISPR-associated protein Cas8a1/Csx13, MYXAN subtype, C-terminal region.
       0.767
cas2-2
CRISPR-associated endoribonuclease Cas2; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain sequences complementary to antecedent mobile elements and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Functions as a ssRNA-specific endoribonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
 
     0.583
cas1-2
CRISPR-associated endonuclease Cas1/CRISPR-associated protein Cas4; CRISPR (clustered regularly interspaced short palindromic repeat), is an adaptive immune system that provides protection against mobile genetic elements (viruses, transposable elements and conjugative plasmids). CRISPR clusters contain spacers, sequences complementary to antecedent mobile elements, and target invading nucleic acids. CRISPR clusters are transcribed and processed into CRISPR RNA (crRNA). Acts as a dsDNA endonuclease. Involved in the integration of spacer DNA into the CRISPR cassette.
 
     0.578
ELR99741.1
PMT family glycosyltransferase, 4-amino-4-deoxy-L-arabinose transferase; PFAM: Dolichyl-phosphate-mannose-protein mannosyltransferase.
  
    0.547
ELR97555.1
PEP-CTERM putative exosortase interaction domain-containing protein; TIGRFAM: PEP-CTERM protein sorting domain; PEP-CTERM protein sorting domain, cyanobacterial subclass.
       0.473
ELR99426.1
PFAM: Protein of unknown function (DUF3611).
  
     0.401
Your Current Organism:
Gloeocapsa sp. PCC73106
NCBI taxonomy Id: 102232
Other names: Chroococcus sp. SAG 6.82, G. sp. PCC 73106, Gloeocapsa sp. ATCC 27928, Gloeocapsa sp. PCC 73106
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