STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELR97900.1Transposase family protein; PFAM: Transposase. (405 aa)    
Predicted Functional Partners:
ELR97901.1
Hypothetical protein.
       0.642
ELR98431.1
PFAM: CRISPR-associated protein (Cas_csx3).
  
     0.453
ELR99171.1
Transposase; PFAM: Putative transposase DNA-binding domain; IMG reference gene:2508646751_SP.
  
     0.447
ELS00244.1
Hypothetical protein.
  
     0.432
ELR97902.1
PFAM: Domain of unknown function DUF29.
       0.430
ELR98062.1
PFAM: Tetratricopeptide repeat.
  
     0.427
ELR97755.1
Hypothetical protein.
  
     0.417
ELS00254.1
Hypothetical protein; IMG reference gene:2508647854_SP.
  
     0.411
ELR97422.1
PFAM: Bacterial pre-peptidase C-terminal domain.
  
     0.401
Your Current Organism:
Gloeocapsa sp. PCC73106
NCBI taxonomy Id: 102232
Other names: Chroococcus sp. SAG 6.82, G. sp. PCC 73106, Gloeocapsa sp. ATCC 27928, Gloeocapsa sp. PCC 73106
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.