STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELR98968.1Heterodisulfide reductase, subunit B; PFAM: Cysteine-rich domain. (298 aa)    
Predicted Functional Partners:
ELR99645.1
TIGRFAM: succinate dehydrogenase and fumarate reductase iron-sulfur protein.
 
 
 0.983
ELR96892.1
PFAM: domain; FAD binding domain; TIGRFAM: succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup.
 
 
 0.970
ELR99635.1
succinyl-CoA synthetase, beta subunit; PFAM: ATP-grasp domain.
  
  
  0.929
ELR99634.1
succinyl-CoA synthetase, alpha subunit; PFAM: CoA binding domain.
 
  
 0.927
fumC
Fumarase, class II; Involved in the TCA cycle. Catalyzes the stereospecific interconversion of fumarate to L-malate; Belongs to the class-II fumarase/aspartase family. Fumarase subfamily.
    
  0.921
ELR96957.1
PFAM: Aminotransferase class I and II.
   
 
  0.914
ELS00179.1
PFAM: Aldehyde dehydrogenase family.
   
 
  0.914
ELR97409.1
PFAM: Coenzyme F420 hydrogenase/dehydrogenase, beta subunit N-term; Coenzyme F420 hydrogenase/dehydrogenase, beta subunit C terminus.
  
 0.778
ELR98967.1
PFAM: Acylphosphatase.
       0.776
ELS00031.1
Hypothetical protein; PFAM: Uncharacterised ACR, YkgG family COG1556.
  
 
 0.741
Your Current Organism:
Gloeocapsa sp. PCC73106
NCBI taxonomy Id: 102232
Other names: Chroococcus sp. SAG 6.82, G. sp. PCC 73106, Gloeocapsa sp. ATCC 27928, Gloeocapsa sp. PCC 73106
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