STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELR99764.1Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB; PFAM: Type II/IV secretion system protein; GSPII_E N-terminal domain. (671 aa)    
Predicted Functional Partners:
ELR99766.1
Type II secretory pathway, component PulF; PFAM: Bacterial type II secretion system protein F domain.
 
 
 0.991
ELR98707.1
PFAM: Competence protein A; TIGRFAM: type IV pilus assembly protein PilM.
 
 
 0.894
ELR97179.1
Prepilin signal peptidase PulO-like peptidase; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
 
 
 0.882
ELR98799.1
PFAM: Prokaryotic N-terminal methylation motif; TIGRFAM: prepilin-type N-terminal cleavage/methylation domain.
 
 0.878
ELR98706.1
PFAM: Fimbrial assembly protein (PilN).
  
 
 0.785
ELR99765.1
PFAM: Type II/IV secretion system protein; TIGRFAM: pilus retraction protein PilT.
 
  
0.782
ELR98704.1
Type II secretory pathway, component HofQ; PFAM: Secretin and TonB N terminus short domain; Bacterial type II and III secretion system protein.
 
 
 
 0.730
ELR98705.1
Hypothetical protein.
  
 
 0.620
ELR98801.1
TIGRFAM: prepilin-type N-terminal cleavage/methylation domain; overlaps another CDS with the same product name.
 
 0.611
ELR96783.1
PFAM: S23 ribosomal protein; TIGRFAM: TIGR02436 family protein.
  
 0.560
Your Current Organism:
Gloeocapsa sp. PCC73106
NCBI taxonomy Id: 102232
Other names: Chroococcus sp. SAG 6.82, G. sp. PCC 73106, Gloeocapsa sp. ATCC 27928, Gloeocapsa sp. PCC 73106
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