ELR99928.1 protein (Gloeocapsa sp. PCC73106)

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

Experiments

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[Homology]

Score

ELR99928.1

PFAM: XisH protein. (90 aa)

Predicted Functional Partners:

ELR99927.1

0.883

ELS00128.1

0.785

ELS00131.1

0.661

ELR99930.1

0.616

ELR98007.1

0.615

ELR96694.1

0.596

ELR98784.1

0.533

ELR99610.1

0.533

ELR99929.1

0.531

ELR96902.1

0.479

Your Current Organism:

Gloeocapsa sp. PCC73106

NCBI taxonomy Id: 102232
Other names: Chroococcus sp. SAG 6.82, G. sp. PCC 73106, Gloeocapsa sp. ATCC 27928, Gloeocapsa sp. PCC 73106

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structured XML interaction data, according to the 'PSI-MI' data standard

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a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

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MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

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a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
ELR96694.1	ELR99927.1	GLO73106DRAFT_00004910	GLO73106DRAFT_00037800	PFAM: HNH endonuclease.	PFAM: XisI protein.	0.460
ELR96694.1	ELR99928.1	GLO73106DRAFT_00004910	GLO73106DRAFT_00037810	PFAM: HNH endonuclease.	PFAM: XisH protein.	0.596
ELR96694.1	ELS00128.1	GLO73106DRAFT_00004910	GLO73106DRAFT_00039830	PFAM: HNH endonuclease.	PFAM: XisI protein.	0.556
ELR96902.1	ELR98007.1	GLO73106DRAFT_00007030	GLO73106DRAFT_00018270	Hypothetical protein.	Hypothetical protein.	0.678
ELR96902.1	ELR99927.1	GLO73106DRAFT_00007030	GLO73106DRAFT_00037800	Hypothetical protein.	PFAM: XisI protein.	0.450
ELR96902.1	ELR99928.1	GLO73106DRAFT_00007030	GLO73106DRAFT_00037810	Hypothetical protein.	PFAM: XisH protein.	0.479
ELR96902.1	ELR99930.1	GLO73106DRAFT_00007030	GLO73106DRAFT_00037830	Hypothetical protein.	Hypothetical protein.	0.601
ELR96902.1	ELS00128.1	GLO73106DRAFT_00007030	GLO73106DRAFT_00039830	Hypothetical protein.	PFAM: XisI protein.	0.456
ELR98007.1	ELR96902.1	GLO73106DRAFT_00018270	GLO73106DRAFT_00007030	Hypothetical protein.	Hypothetical protein.	0.678
ELR98007.1	ELR99927.1	GLO73106DRAFT_00018270	GLO73106DRAFT_00037800	Hypothetical protein.	PFAM: XisI protein.	0.646
ELR98007.1	ELR99928.1	GLO73106DRAFT_00018270	GLO73106DRAFT_00037810	Hypothetical protein.	PFAM: XisH protein.	0.615
ELR98007.1	ELS00128.1	GLO73106DRAFT_00018270	GLO73106DRAFT_00039830	Hypothetical protein.	PFAM: XisI protein.	0.662
ELR98784.1	ELR99927.1	GLO73106DRAFT_00026220	GLO73106DRAFT_00037800	PFAM: Protein of unknown function (DUF2887); TIGRFAM: conserved hypothetical protein (putative transposase or invertase); IMG reference gene:2508646350_SP.	PFAM: XisI protein.	0.476
ELR98784.1	ELR99928.1	GLO73106DRAFT_00026220	GLO73106DRAFT_00037810	PFAM: Protein of unknown function (DUF2887); TIGRFAM: conserved hypothetical protein (putative transposase or invertase); IMG reference gene:2508646350_SP.	PFAM: XisH protein.	0.533
ELR98784.1	ELS00131.1	GLO73106DRAFT_00026220	GLO73106DRAFT_00039860	PFAM: Protein of unknown function (DUF2887); TIGRFAM: conserved hypothetical protein (putative transposase or invertase); IMG reference gene:2508646350_SP.	PFAM: Protein of unknown function (DUF2887).	0.737
ELR99610.1	ELR99927.1	GLO73106DRAFT_00034620	GLO73106DRAFT_00037800	PFAM: Protein of unknown function (DUF2887); TIGRFAM: conserved hypothetical protein (putative transposase or invertase); IMG reference gene:2508647201_SP.	PFAM: XisI protein.	0.476
ELR99610.1	ELR99928.1	GLO73106DRAFT_00034620	GLO73106DRAFT_00037810	PFAM: Protein of unknown function (DUF2887); TIGRFAM: conserved hypothetical protein (putative transposase or invertase); IMG reference gene:2508647201_SP.	PFAM: XisH protein.	0.533
ELR99610.1	ELS00131.1	GLO73106DRAFT_00034620	GLO73106DRAFT_00039860	PFAM: Protein of unknown function (DUF2887); TIGRFAM: conserved hypothetical protein (putative transposase or invertase); IMG reference gene:2508647201_SP.	PFAM: Protein of unknown function (DUF2887).	0.737
ELR99927.1	ELR96694.1	GLO73106DRAFT_00037800	GLO73106DRAFT_00004910	PFAM: XisI protein.	PFAM: HNH endonuclease.	0.460
ELR99927.1	ELR96902.1	GLO73106DRAFT_00037800	GLO73106DRAFT_00007030	PFAM: XisI protein.	Hypothetical protein.	0.450