STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3RIG7_TRIADUncharacterized protein. (358 aa)    
Predicted Functional Partners:
B3S489_TRIAD
B30.2/SPRY domain-containing protein.
    
 0.739
B3SCU4_TRIAD
Uncharacterized protein.
    
 0.725
B3RUM8_TRIAD
Histone H4; Core component of nucleosome. Nucleosomes wrap and compact DNA into chromatin, limiting DNA accessibility to the cellular machineries which require DNA as a template. Histones thereby play a central role in transcription regulation, DNA repair, DNA replication and chromosomal stability. DNA accessibility is regulated via a complex set of post-translational modifications of histones, also called histone code, and nucleosome remodeling.
    
 0.715
B3S818_TRIAD
COP9 complex subunit 2.
   
  
 0.670
B3RUC5_TRIAD
JmjC domain-containing protein.
   
 0.648
B3S6F0_TRIAD
Uncharacterized protein.
      
 0.584
B3RY68_TRIAD
ATG11 domain-containing protein.
   
 
 0.560
B3S782_TRIAD
DH domain-containing protein.
   
  
 0.551
B3RNV5_TRIAD
Uncharacterized protein.
   
  
 0.549
B3S4K2_TRIAD
Uncharacterized protein.
      
 0.549
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.