STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3RLS8_TRIADUncharacterized protein. (337 aa)    
Predicted Functional Partners:
B3RLT2_TRIAD
Uncharacterized protein.
      
 0.620
B3S218_TRIAD
BRCT domain-containing protein.
 
 
    0.613
B3SD21_TRIAD
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
   
    0.584
B3RU87_TRIAD
Uncharacterized protein.
   
    0.581
B3RQD6_TRIAD
Uncharacterized protein.
      
 0.548
B3RW79_TRIAD
Uncharacterized protein.
 
      0.544
B3RIW6_TRIAD
Complex1_49kDa domain-containing protein; Belongs to the complex I 49 kDa subunit family.
   
    0.505
B3RM40_TRIAD
Deoxyhypusine hydroxylase; Catalyzes the hydroxylation of the N(6)-(4-aminobutyl)-L- lysine intermediate to form hypusine, an essential post-translational modification only found in mature eIF-5A factor; Belongs to the deoxyhypusine hydroxylase family.
  
 
 0.505
B3SEQ1_TRIAD
Predicted protein.
   
    0.505
B3SD18_TRIAD
Ribosome assembly factor mrt4; Component of the ribosome assembly machinery. Nuclear paralog of the ribosomal protein P0, it binds pre-60S subunits at an early stage of assembly in the nucleolus, and is replaced by P0 in cytoplasmic pre-60S subunits and mature 80S ribosomes.
   
    0.454
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.