STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3RM39_TRIADUncharacterized protein. (510 aa)    
Predicted Functional Partners:
B3SAN1_TRIAD
Uncharacterized protein.
   
 0.983
B3SC73_TRIAD
SET domain-containing protein.
    
 
 0.939
B3RR98_TRIAD
Uncharacterized protein.
   
 0.935
B3RW23_TRIAD
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.922
B3SEF0_TRIAD
Uncharacterized protein; Belongs to the SKP1 family.
    
 0.922
B3S765_TRIAD
Uncharacterized protein.
   
 0.830
B3RYK4_TRIAD
Hist_deacetyl domain-containing protein.
   
 0.799
B3RZT5_TRIAD
Hist_deacetyl domain-containing protein.
   
 0.799
B3S1T9_TRIAD
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.799
B3S2E2_TRIAD
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
   
 0.799
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.