STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3RMG2_TRIADLactamase_B domain-containing protein. (380 aa)    
Predicted Functional Partners:
B3RMG1_TRIAD
Lactamase_B_4 domain-containing protein.
 
  
  0.991
B3S353_TRIAD
Uncharacterized protein.
   
  
 0.682
B3RW81_TRIAD
Uncharacterized protein.
   
   0.623
B3RW82_TRIAD
Endonuclease.
   
   0.623
B3RTD1_TRIAD
Uncharacterized protein.
  
 
 0.593
B3RZJ7_TRIAD
HRDC domain-containing protein.
  
 
 0.587
B3SDM2_TRIAD
Ribonuclease; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase HII family.
     
 0.585
B3RYQ1_TRIAD
Uncharacterized protein; Belongs to the tRNA nucleotidyltransferase/poly(A) polymerase family.
  
  
 0.582
B3RJG2_TRIAD
SAM_MT_RSMB_NOP domain-containing protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. RsmB/NOP family.
   
  
 0.575
B3RXS2_TRIAD
EH domain-containing protein.
  
  
 0.564
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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