STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3RN29_TRIADUbiquitin carboxyl-terminal hydrolase. (921 aa)    
Predicted Functional Partners:
B3S1Q4_TRIAD
MPN domain-containing protein.
   
 
 0.809
B3RY85_TRIAD
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
      
 0.795
B3RYE1_TRIAD
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.598
B3SAB9_TRIAD
Uncharacterized protein; Belongs to the universal ribosomal protein uL11 family.
    
 
 0.590
B3RUS1_TRIAD
Tafazzin family protein; Belongs to the taffazin family.
 
      0.578
B3RT26_TRIAD
Uncharacterized protein.
   
 
 0.572
B3S005_TRIAD
Uncharacterized protein.
    
 
 0.568
B3S0W8_TRIAD
Uncharacterized protein.
    
 
 0.548
B3S5R7_TRIAD
Ribosomal_S17_N domain-containing protein; Belongs to the universal ribosomal protein uS17 family.
    
 
 0.528
B3SFC0_TRIAD
Ribosomal_L6 domain-containing protein; Belongs to the universal ribosomal protein uL6 family.
    
 
 0.527
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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