STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3RPI8_TRIADPX domain-containing protein. (457 aa)    
Predicted Functional Partners:
B3S4Z3_TRIAD
PX domain-containing protein.
  
 
 
0.976
B3S1P7_TRIAD
Uncharacterized protein.
    
 0.955
B3S7E2_TRIAD
Uncharacterized protein.
   
 
 0.833
B3S6A4_TRIAD
Vacuolar protein sorting-associated protein 29; Acts as component of the retromer cargo-selective complex (CSC). The CSC is believed to be the core functional component of retromer or respective retromer complex variants acting to prevent missorting of selected transmembrane cargo proteins into the lysosomal degradation pathway.
    
 
 0.817
B3RKP8_TRIAD
Uncharacterized protein.
   
 
 0.791
B3RJN7_TRIAD
V-SNARE coiled-coil homology domain-containing protein.
    
 0.763
B3RZP5_TRIAD
Vamp.
    
 0.763
B3S0M6_TRIAD
PX domain-containing protein.
   
 0.761
B3S541_TRIAD
Protein kinase domain-containing protein.
   
 
 0.713
B3S2G8_TRIAD
Vamp.
    
 0.697
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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