STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3RPS8_TRIADJosephin domain-containing protein. (193 aa)    
Predicted Functional Partners:
B3RJY2_TRIAD
Ubiquitin-like domain-containing protein.
   
 0.865
B3SCG5_TRIAD
Ubiquitin-like domain-containing protein.
    
  0.809
B3RKZ9_TRIAD
Josephin domain-containing protein.
     
 0.784
B3RVY0_TRIAD
PRELI/MSF1 domain-containing protein.
      
 0.765
B3S1Q4_TRIAD
MPN domain-containing protein.
    
 
 0.719
B3S2J7_TRIAD
Uncharacterized protein.
   
 0.687
B3RVF2_TRIAD
Ubiquitin-like domain-containing protein.
   
 0.635
B3RWA2_TRIAD
UBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family.
      
 0.627
B3RM63_TRIAD
Uncharacterized protein.
      
 0.624
B3S7W7_TRIAD
Biogenesis of lysosome-related organelles complex 1 subunit 6; Component of the biogenesis of lysosome-related organelles complex-1 (BLOC-1) involved in pigment granule biogenesis.
      
 0.622
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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