STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3RRY3_TRIADPredicted protein. (275 aa)    
Predicted Functional Partners:
B3RX31_TRIAD
Uncharacterized protein.
   
   0.964
B3S625_TRIAD
Uncharacterized protein.
   
 
 0.954
B3SAD4_TRIAD
Uncharacterized protein.
   
 
 0.929
B3RQ51_TRIAD
U2 snRNP auxiliary factor large subunit; Necessary for the splicing of pre-mRNA. Belongs to the splicing factor SR family.
    
 
 0.902
B3S6E7_TRIAD
Uncharacterized protein.
    
 
 0.843
B3RJF1_TRIAD
CPSF_A domain-containing protein.
    
 
 0.838
B3S7I1_TRIAD
Uncharacterized protein.
   
 
 0.817
B3SCB3_TRIAD
Uncharacterized protein.
   
   0.811
B3RJS6_TRIAD
PSP domain-containing protein.
   
 
 0.805
B3RSZ9_TRIAD
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
    
 
 0.804
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.