STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3RSK6_TRIADPredicted protein. (675 aa)    
Predicted Functional Partners:
B3S6S4_TRIAD
Uncharacterized protein.
    
 0.573
B3RRW2_TRIAD
Uncharacterized protein.
    
 0.460
B3S0L7_TRIAD
TATA-binding protein.
    
 0.460
B3RMV4_TRIAD
Uncharacterized protein.
    
 0.456
B3RJT9_TRIAD
RING-type domain-containing protein.
    
 0.453
B3RN79_TRIAD
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
   
    0.426
B3RTQ3_TRIAD
DNA-directed RNA polymerases I, II, and III subunit RPABC3; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Common component of RNA polymerases I, II and III which synthesize ribosomal RNA precursors, mRNA precursors and many functional non- coding RNAs, and small RNAs, such as 5S rRNA and tRNAs, respectively.
   
 
  0.417
B3S7I9_TRIAD
Uncharacterized protein.
   
  0.414
B3S2C1_TRIAD
Uncharacterized protein.
    
 0.404
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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