STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3RV97_TRIADUBIQUITIN_CONJUGAT_2 domain-containing protein; Belongs to the ubiquitin-conjugating enzyme family. (180 aa)    
Predicted Functional Partners:
B3RUQ2_TRIAD
WD_REPEATS_REGION domain-containing protein.
    
 0.991
B3S490_TRIAD
CULLIN_2 domain-containing protein; Belongs to the cullin family.
    
 0.989
B3RRI2_TRIAD
TPR_REGION domain-containing protein.
    
 0.988
B3S5G1_TRIAD
TPR_REGION domain-containing protein.
   
 0.987
B3RNP3_TRIAD
TPR_REGION domain-containing protein.
    
 0.984
B3RXI7_TRIAD
Uncharacterized protein.
   
 0.983
B3RP33_TRIAD
ANAPC5 domain-containing protein.
    
 0.982
B3RPW8_TRIAD
Anaphase-promoting complex subunit 10; Component of the anaphase promoting complex/cyclosome (APC/C), a cell cycle-regulated E3 ubiquitin-protein ligase complex that controls progression through mitosis and the G1 phase of the cell cycle.
    
 0.981
B3RXF9_TRIAD
Cyclin N-terminal domain-containing protein; Belongs to the cyclin family.
   
 0.980
B3RJK1_TRIAD
Uncharacterized protein.
    
 0.973
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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