STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3RVX6_TRIADUncharacterized protein. (250 aa)    
Predicted Functional Partners:
B3S7G8_TRIAD
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
   
  0.995
B3RYE1_TRIAD
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
  
 
 0.973
B3RMP0_TRIAD
Uncharacterized protein.
  
 
 0.971
B3RT26_TRIAD
Uncharacterized protein.
   
 
 0.971
B3RXS2_TRIAD
EH domain-containing protein.
   
 0.970
B3RN79_TRIAD
Ribosomal protein S18; Belongs to the universal ribosomal protein uS13 family.
  
 
 0.968
B3SCT2_TRIAD
Uncharacterized protein; Belongs to the bacterial ribosomal protein bL17 family.
  
 
 0.968
B3RPJ5_TRIAD
Ribosomal protein; Belongs to the bacterial ribosomal protein bL36 family.
  
 
 0.967
B3SDQ2_TRIAD
Uncharacterized protein; Belongs to the universal ribosomal protein uS8 family.
  
 
 0.967
B3S688_TRIAD
Ribosomal_L23eN domain-containing protein; Belongs to the universal ribosomal protein uL23 family.
  
 0.965
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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