STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
B3RWS2_TRIADrRNA adenine N(6)-methyltransferase; Belongs to the class I-like SAM-binding methyltransferase superfamily. rRNA adenine N(6)-methyltransferase family. (319 aa)    
Predicted Functional Partners:
B3RXA6_TRIAD
DNA-directed RNA polymerase; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the phage and mitochondrial RNA polymerase family.
   
 0.991
B3SA57_TRIAD
Uncharacterized protein.
   
 
 0.881
B3RY85_TRIAD
tRNA-binding domain-containing protein; Belongs to the class-I aminoacyl-tRNA synthetase family.
     
 0.871
B3RIJ5_TRIAD
GPN-loop GTPase; Small GTPase required for proper nuclear import of RNA polymerase II (RNAPII). May act at an RNAP assembly step prior to nuclear import.
 
 
    0.854
TRIADDRAFT_527
Bms1-type G domain-containing protein.
   
 
 0.826
B3S7G8_TRIAD
40S ribosomal protein S30; Belongs to the eukaryotic ribosomal protein eS30 family.
    
   0.804
B3RX86_TRIAD
WD_REPEATS_REGION domain-containing protein.
   
 
 0.803
B3RUU5_TRIAD
Brix domain-containing protein.
   
   0.796
B3S9K7_TRIAD
WD_REPEATS_REGION domain-containing protein.
   
   0.781
B3RYE1_TRIAD
Uncharacterized protein; Belongs to the universal ribosomal protein uS9 family.
   
 
 0.771
Your Current Organism:
Trichoplax adhaerens
NCBI taxonomy Id: 10228
Other names: T. adhaerens
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